STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107890880CRAL-TRIO domain-containing protein C3H8.02-like isoform X1. (263 aa)    
Predicted Functional Partners:
LOC107897757
CRAL-TRIO domain-containing protein YKL091C-like.
    
 
0.526
LOC107945490
CRAL-TRIO domain-containing protein YKL091C-like.
    
 
0.526
LOC107943697
Patellin-4-like.
      
 0.513
LOC107885936
Phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like.
      
 0.505
LOC107950263
Uncharacterized protein LOC107950263.
      
 0.505
LOC107891352
Ganglioside-induced differentiation-associated protein 2-like.
      
 0.497
LOC107889379
Rho GTPase-activating protein 68F-like isoform X1.
      
 0.497
LOC107903928
Protein GDAP2 homolog isoform X1.
      
 0.459
LOC107920220
Phosphatidylinositol/phosphatidylcholine transfer protein SFH13-like isoform X1.
      
0.459
LOC107960328
Protein GDAP2 homolog.
      
 0.459
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.