STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107891864LOW QUALITY PROTEIN: probable histone-arginine methyltransferase 1.3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (540 aa)    
Predicted Functional Partners:
LOC107900868
Multifunctional methyltransferase subunit TRM112-like protein At1g22270.
   
 0.745
LOC107899923
Transcription factor bHLH131-like.
    
 0.626
LOC107925712
Transcription factor bHLH106.
    
 0.626
LOC107931741
Transcription factor bHLH51-like.
    
 0.626
LOC107936329
Transcription factor bHLH51-like.
    
 0.626
LOC107957820
Transcription factor bHLH30-like.
    
 0.626
LOC107953158
Bystin-like.
   
 0.596
LOC107954112
Bystin-like.
   
 0.596
LOC107932997
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.594
LOC107897854
Histone acetyltransferase GCN5-like.
   
 0.581
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (18%) [HD]