STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107890335Uncharacterized protein LOC107890335. (200 aa)    
Predicted Functional Partners:
LOC107901704
Protein TIME FOR COFFEE-like isoform X3.
  
     0.507
LOC107958111
BRI1 kinase inhibitor 1-like.
  
     0.504
LOC107915503
Protein TIME FOR COFFEE-like.
  
     0.503
LOC107928513
Protein TIME FOR COFFEE-like.
  
     0.503
LOC107955219
Uncharacterized protein LOC107955219.
  
     0.500
LOC107892640
Uncharacterized protein LOC107892640.
  
     0.492
LOC107919351
Heavy metal-associated isoprenylated plant protein 26-like.
  
     0.476
LOC107887320
Sialidase-like.
  
     0.474
LOC107903831
Sialidase-like.
  
     0.464
LOC107962703
Probable nuclear hormone receptor HR38 isoform X1.
  
    0.464
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.