STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107894704L10-interacting MYB domain-containing protein-like. (321 aa)    
Predicted Functional Partners:
LOC107915844
mRNA-decapping enzyme subunit 2.
   
 0.608
LOC107887383
D-aminoacyl-tRNA deacylase-like.
    
 0.516
LOC107912102
D-aminoacyl-tRNA deacylase-like isoform X1.
    
 0.516
LOC107936385
D-aminoacyl-tRNA deacylase-like isoform X1.
    
 0.516
LOC107943379
D-aminoacyl-tRNA deacylase-like isoform X1.
    
 0.516
LOC107921159
Exosome complex component rrp43-like isoform X1.
    
  0.513
LOC107921769
Exosome complex component RRP43-like.
    
  0.513
LOC107928852
Exosome complex component RRP43-like.
    
  0.513
LOC107931625
Exosome complex component RRP43-like.
    
  0.513
LOC107934100
Exosome complex component RRP43-like.
    
  0.513
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.