STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107893777F-box protein At5g07610-like isoform X1. (397 aa)    
Predicted Functional Partners:
LOC107912051
Uncharacterized protein LOC107912051 isoform X2.
  
 
   0.502
LOC107937459
Uncharacterized protein LOC107912051 isoform X1.
  
 
   0.500
LOC107934414
EID1-like F-box protein 3.
  
     0.498
LOC107936858
EID1-like F-box protein 3.
  
     0.498
LOC107930236
Protein BRANCHLESS TRICHOME-like.
  
     0.497
LOC107921077
F-box protein SKIP23-like.
  
     0.494
LOC107923123
Uncharacterized protein LOC107923123.
  
 
   0.494
LOC107947210
Protein BRANCHLESS TRICHOME-like.
  
     0.494
LOC107892846
Protein BRANCHLESS TRICHOME-like.
  
     0.493
LOC107943524
Protein BRANCHLESS TRICHOME-like.
  
     0.492
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.