STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107894876Probable aldo-keto reductase 1. (338 aa)    
Predicted Functional Partners:
LOC107915059
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.690
LOC107902497
Probable terpene synthase 9; Belongs to the terpene synthase family.
      
 0.658
LOC107903038
Probable terpene synthase 9.
      
 0.658
LOC107903948
Probable terpene synthase 9.
      
 0.658
LOC107904340
Probable terpene synthase 9.
      
 0.658
LOC107904182
Probable terpene synthase 9.
      
 0.658
LOC107919180
Probable terpene synthase 9.
      
 0.658
LOC107963127
Probable terpene synthase 9.
      
 0.658
LOC107963458
Probable terpene synthase 9.
      
 0.658
LOC107951336
4-coumarate--CoA ligase-like 5.
    
 0.626
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.