STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107897368Transcription factor bHLH87-like. (413 aa)    
Predicted Functional Partners:
LOC107905164
Growth-regulating factor 1-like.
  
     0.516
LOC107957891
Growth-regulating factor 1-like.
  
     0.512
LOC107945478
Uncharacterized protein LOC107945478.
  
     0.511
LOC107934048
Uncharacterized protein LOC107934048.
  
     0.510
LOC107905212
Growth-regulating factor 1-like.
  
     0.507
LOC107951424
Growth-regulating factor 1-like isoform X1.
  
     0.507
LOC107941922
Growth-regulating factor 1-like.
  
     0.504
LOC107930961
WUSCHEL-related homeobox 1-like.
  
     0.501
LOC107893725
Protein TIFY 6B-like isoform X1.
  
     0.500
LOC107910325
Growth-regulating factor 1-like isoform X1.
  
     0.500
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.