STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107895689Peptidylprolyl isomerase. (255 aa)    
Predicted Functional Partners:
LOC107940278
Peptidylprolyl isomerase.
  
 0.857
LOC107962055
Uncharacterized protein LOC107962055.
    
 0.769
LOC107936805
DNA repair protein RAD4.
    
 0.732
LOC107921209
Peptidylprolyl isomerase.
  
 0.697
LOC107937836
Kinesin-like calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.681
LOC107939602
Kinesin-like calmodulin-binding protein isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.681
LOC107889787
Embryonic protein DC-8-like.
   
 0.679
LOC107908729
Embryonic protein DC-8-like.
   
 0.679
LOC107930476
Protein TIME FOR COFFEE-like.
   
 0.656
LOC107886775
Two pore calcium channel protein 1-like.
    
 
 0.646
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.