Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107898029Proline-rich receptor-like protein kinase PERK13. (758 aa)    
Predicted Functional Partners:
LOC107943835
Classical arabinogalactan protein 5.
    
 0.452
LOC107889586
Phosphoenolpyruvate carboxylase kinase 1-like; Belongs to the protein kinase superfamily.
  
 
  0.450
LOC107926832
Phosphoenolpyruvate carboxylase kinase 1-like; Belongs to the protein kinase superfamily.
  
 
  0.447
LOC107934498
CDPK-related kinase 5-like isoform X1.
  
 
  0.434
LOC107945410
CDPK-related kinase 5-like isoform X1.
  
 
  0.434
LOC107954431
CDPK-related kinase 3-like isoform X1.
  
 
  0.429
LOC107891389
CDPK-related kinase 7-like isoform X1.
  
 
  0.428
LOC107948907
CDPK-related kinase 4-like isoform X1.
  
 
  0.428
LOC107897804
CDPK-related kinase 5 isoform X1.
  
 
  0.427
LOC107913204
CDPK-related kinase 5-like.
  
 
  0.426
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.