STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107898270Probable LRR receptor-like serine/threonine-protein kinase At4g36180. (331 aa)    
Predicted Functional Partners:
LOC107920923
Uncharacterized protein At4g06744-like.
  
     0.496
LOC107916560
Uncharacterized protein At4g06744-like.
  
     0.495
LOC107918133
Uncharacterized protein At4g06744-like.
  
     0.492
LOC107921880
Pollen-specific leucine-rich repeat extensin-like protein 4.
  
 
  0.468
LOC107962948
Receptor-like kinase TMK4 isoform X1.
  
     0.467
LOC107933983
Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130.
  
     0.466
LOC107892417
Probable leucine-rich repeat receptor-like protein kinase At1g35710.
  
     0.464
LOC107956074
Receptor-like protein 12.
  
     0.458
LOC107902665
Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380.
  
     0.451
LOC107938464
Somatic embryogenesis receptor kinase 2-like.
  
 
  0.443
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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