STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107899699Uncharacterized protein LOC107899699 isoform X1. (307 aa)    
Predicted Functional Partners:
LOC107910873
Uncharacterized protein LOC107910873.
  
     0.512
LOC107907236
Uncharacterized protein LOC107907236.
  
     0.497
LOC107932946
Uncharacterized protein LOC107932946.
  
     0.494
LOC107909197
Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3-like isoform X1.
  
     0.492
LOC107942474
Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3-like.
  
     0.492
LOC107907419
Uncharacterized protein LOC107907419.
  
     0.491
LOC107905902
Uncharacterized protein LOC107905902.
  
     0.487
LOC107910069
Uncharacterized protein LOC107910069.
  
     0.487
LOC107917885
Uncharacterized protein At3g49140-like isoform X1.
  
     0.480
LOC107890161
Uncharacterized protein At3g49140-like.
  
     0.479
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.