STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107898648Uncharacterized protein LOC107898648; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (579 aa)    
Predicted Functional Partners:
LOC107911563
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.676
LOC107959286
Integrator complex subunit 3-like.
    
 0.646
LOC107928034
Integrator complex subunit 9 homolog isoform X1.
    
 0.593
LOC107962357
Integrator complex subunit 9 homolog isoform X1.
    
 0.593
LOC107899593
Protein SIEL-like.
    
 0.568
LOC107948957
Protein SIEL-like.
    
 0.568
LOC107927639
Uncharacterized protein LOC107927639 isoform X1.
    
 0.565
LOC107945291
Uncharacterized protein LOC107945291 isoform X1.
    
 0.565
LOC107930157
SOSS complex subunit B homolog.
    
  0.479
LOC107936897
SOSS complex subunit B homolog.
    
  0.479
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.