STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107903398BTB/POZ and TAZ domain-containing protein 3-like. (398 aa)    
Predicted Functional Partners:
LOC107943835
Classical arabinogalactan protein 5.
   
 0.754
LOC107899891
Uncharacterized protein LOC107899891.
   
  0.713
LOC107909356
Histone-lysine N-methyltransferase SUVR5-like isoform X1.
    
 0.701
LOC107909358
Histone-lysine N-methyltransferase SUVR5-like.
    
 0.701
LOC107922958
Histone-lysine N-methyltransferase SUVR5-like.
    
 0.701
LOC107940587
Histone-lysine N-methyltransferase SUVR5-like isoform X1.
    
 0.701
LOC107940591
Histone-lysine N-methyltransferase SUVR5-like.
    
 0.701
LOC107961880
Histone-lysine N-methyltransferase SUV39H2-like.
    
 0.701
LOC107955581
DNA repair protein UVH3-like isoform X1.
   
 0.699
LOC107958580
DNA repair protein UVH3-like isoform X1.
   
 0.699
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (12%) [HD]