STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107903668Protein trichome birefringence-like 31. (411 aa)    
Predicted Functional Partners:
LOC107905864
Protein REDUCED WALL ACETYLATION 3-like.
      
 0.505
LOC107960252
Protein REDUCED WALL ACETYLATION 3 isoform X1.
      
 0.505
LOC107890014
LOW QUALITY PROTEIN: protein REDUCED WALL ACETYLATION 2.
      
 0.469
LOC107896405
Protein REDUCED WALL ACETYLATION 2-like isoform X1.
      
 0.469
LOC107916221
Protein REDUCED WALL ACETYLATION 2-like isoform X1.
      
 0.469
LOC107893705
SWIM-type domain-containing protein.
  
     0.466
LOC107910591
SWIM-type domain-containing protein.
  
     0.464
LOC107901826
SWIM-type domain-containing protein.
  
     0.455
LOC107962074
SWIM-type domain-containing protein.
  
     0.455
LOC107906718
Protein FAR1-RELATED SEQUENCE 4-like isoform X1.
  
     0.452
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.