STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107903666Uncharacterized protein LOC107903666 isoform X1. (602 aa)    
Predicted Functional Partners:
LOC107911708
Citrate synthase.
  
 0.900
LOC107924402
Citrate synthase.
  
 0.900
LOC107905799
Citrate synthase; Belongs to the citrate synthase family.
  
 0.890
LOC107913953
Citrate synthase; Belongs to the citrate synthase family.
  
 0.890
MASY_GOSHI
Malate synthase, glyoxysomal.
   
 0.781
LOC107919071
Fumarate hydratase 1, mitochondrial-like.
  
 0.754
LOC107944616
Fumarate hydratase class II-like.
  
 0.754
LOC107953056
Fumarate hydratase 1, mitochondrial isoform X1.
  
 0.754
LOC107953588
Fumarate hydratase 1, mitochondrial-like isoform X1.
  
 0.754
LOC107886890
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 0.740
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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