STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107903149Uncharacterized protein LOC107903149. (150 aa)    
Predicted Functional Partners:
LOC107907053
Uncharacterized protein LOC107907053.
  
     0.533
LOC107958803
Uncharacterized protein LOC107958803.
  
     0.530
LOC107960579
DELLA protein GAI-like; Belongs to the GRAS family.
  
     0.519
LOC107889958
Uncharacterized protein LOC107889958.
  
     0.517
LOC107948479
Uncharacterized protein LOC107948479.
  
     0.515
LOC107947530
Putative invertase inhibitor.
  
     0.513
LOC107898389
Protein LITTLE ZIPPER 3.
  
     0.512
LOC107956668
Putative invertase inhibitor.
  
     0.512
LOC107898482
KS1 protein-like.
  
     0.509
LOC107960430
Probable disease resistance protein RF45.
  
     0.507
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.