STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107902868AP2/ERF and B3 domain-containing transcription factor At1g51120-like. (296 aa)    
Predicted Functional Partners:
LOC107899611
Uncharacterized protein LOC107899611.
  
     0.438
LOC107910314
QWRF motif-containing protein 2-like.
  
     0.433
LOC107889170
Transcription factor TGA2-like.
  
     0.427
LOC107891518
Transcription factor TGA2-like.
  
     0.426
LOC107936211
LOB domain-containing protein 15-like.
  
     0.422
LOC107954138
Transcription factor HBP-1b(C38)-like isoform X1.
  
     0.416
LOC107953264
Transcription factor HBP-1b(C38)-like isoform X1.
  
     0.414
LOC107926061
Transcription factor TGA4-like isoform X1.
  
     0.408
LOC107945517
Transcription factor TGA4-like isoform X1.
  
     0.405
LOC107959366
Transcription factor HBP-1b(C38)-like isoform X1.
  
     0.403
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.