STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107905201Transcription factor bHLH93-like. (340 aa)    
Predicted Functional Partners:
LOC107929334
Zinc finger protein ZAT1-like.
  
     0.516
LOC107951704
Transcription repressor OFP13-like isoform X1.
  
     0.514
LOC107886076
Zinc finger protein ZAT9.
  
     0.512
LOC107934068
Zinc finger protein ZAT4-like.
  
     0.512
LOC107946911
Zinc finger protein ZAT1-like.
  
     0.512
LOC107912117
Uncharacterized protein LOC107912117 isoform X1.
  
     0.497
LOC107928155
Transcription repressor OFP15-like.
  
     0.496
LOC107925557
Transcription repressor OFP15-like.
  
     0.495
LOC107892101
Uncharacterized protein LOC107892101 isoform X1.
  
     0.488
LOC107887105
Uncharacterized protein LOC107887105.
  
     0.479
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.