STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107904288Type 1 phosphatases regulator ypi1-like. (122 aa)    
Predicted Functional Partners:
LOC107889225
Serine/threonine-protein phosphatase.
    
 
 0.570
LOC107893196
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.570
LOC107894158
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.570
LOC107899082
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.570
LOC107900734
Protein enabled-like.
    
 
 0.570
LOC107900551
Serine/threonine-protein phosphatase.
    
 
 0.570
LOC107904181
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.570
LOC107906581
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.570
LOC107906665
Serine/threonine-protein phosphatase.
    
 
 0.570
LOC107910295
Uncharacterized protein LOC107910295.
    
 
 0.570
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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