STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107905939Uncharacterized protein LOC107905939. (432 aa)    
Predicted Functional Partners:
LOC107905693
tRNA methyltransferase 10 homolog A-like.
   
 0.478
LOC107907402
tRNA (Guanine(9)-N1)-methyltransferase-like isoform X1.
   
 0.478
LOC107934485
Zinc finger CCCH domain-containing protein 62-like isoform X1.
  
     0.458
LOC107925668
NDR1/HIN1-Like protein 3-like.
  
     0.456
LOC107945409
Zinc finger CCCH domain-containing protein 62-like.
  
     0.456
LOC107931513
Uncharacterized protein LOC107931513.
  
     0.453
LOC107889436
Protein YLS9-like.
  
     0.451
LOC107935165
Uncharacterized protein LOC107935165 isoform X1.
  
     0.449
LOC107928134
NDR1/HIN1-Like protein 3-like.
  
     0.445
LOC107916412
Zinc finger CCCH domain-containing protein 62-like.
 
    0.441
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.