STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107906097Protein HOTHEAD-like. (593 aa)    
Predicted Functional Partners:
LOC107915695
Cytochrome P450 77A3-like; Belongs to the cytochrome P450 family.
   
 
 0.917
LOC107925484
Cytochrome P450 77A3-like; Belongs to the cytochrome P450 family.
   
 
 0.917
LOC107945739
Cytochrome P450 77A3-like; Belongs to the cytochrome P450 family.
   
 
 0.917
LOC107924954
Cytochrome P450 77A4-like; Belongs to the cytochrome P450 family.
   
 
 0.915
LOC107918628
Cytochrome P450 704B1-like.
     
 0.912
LOC107946410
Cytochrome P450 704B1-like.
     
 0.912
LOC107893212
Ankyrin-1-like isoform X1.
    
 0.817
LOC107920489
Ankyrin-1-like isoform X1.
    
 0.817
LOC107909410
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.778
LOC107944979
L-arabinolactonase-like.
  
 
 0.747
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.