STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107904716Uncharacterized protein LOC107904716. (148 aa)    
Predicted Functional Partners:
rps2
30S ribosomal protein S2, chloroplastic.
  
 0.998
LOC107917933
LOW QUALITY PROTEIN: ribosomal protein S14, mitochondrial.
   
 0.997
LOC107922572
Uncharacterized protein LOC107922572; Belongs to the universal ribosomal protein uS5 family.
   
 0.997
LOC107936164
30S ribosomal protein S12, chloroplastic; Belongs to the universal ribosomal protein uS12 family.
  
 0.997
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
  
 0.997
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
   
 0.997
rps12-2
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.997
LOC107891244
28S ribosomal protein S9, mitochondrial-like; Belongs to the universal ribosomal protein uS9 family.
   
 0.995
LOC107889490
28S ribosomal protein S9, mitochondrial-like; Belongs to the universal ribosomal protein uS9 family.
   
 0.995
LOC107933212
50S ribosomal protein L25-like.
  
 
 0.995
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.