STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107906507Uncharacterized protein LOC107906507. (404 aa)    
Predicted Functional Partners:
LOC107886344
Uncharacterized protein LOC107886344.
  
     0.531
LOC107919974
Uncharacterized protein LOC107919974 isoform X1.
  
     0.488
LOC107916255
Uncharacterized protein LOC107916255.
  
     0.482
LOC107896562
Uncharacterized protein LOC107896562.
  
     0.481
LOC107928481
Uncharacterized protein LOC107928481.
      
 0.480
LOC107936491
Uncharacterized protein LOC107936491.
      
 0.480
LOC107936531
WEB family protein At1g75720-like.
  
     0.480
LOC107900594
Uncharacterized protein LOC107900594.
      
0.478
LOC107963401
Uncharacterized protein LOC107963401.
      
0.478
LOC107925958
Calmodulin-binding protein 25-like.
  
     0.477
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.