STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107907924Uncharacterized protein At4g15970-like. (375 aa)    
Predicted Functional Partners:
LOC107910046
Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1.
  
     0.515
LOC107905045
Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1.
  
     0.514
LOC107902933
Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1.
  
     0.513
LOC107889171
F-box/LRR-repeat protein At1g67190-like isoform X1.
  
     0.505
LOC107891519
F-box/LRR-repeat protein At1g67190-like.
  
     0.505
LOC107911252
Uncharacterized protein LOC107911252.
  
     0.503
LOC107941484
Factor of DNA methylation 1-like isoform X1.
  
     0.503
LOC107939041
Uncharacterized protein LOC107939041.
  
     0.501
LOC107933363
Uncharacterized protein LOC107933363.
  
     0.497
LOC107938757
Uncharacterized protein LOC107938757.
  
     0.497
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.