STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107906844Uncharacterized protein LOC107906844. (336 aa)    
Predicted Functional Partners:
LOC107898034
Uncharacterized protein LOC107898034.
  
     0.497
LOC107899939
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.492
LOC107919290
Uncharacterized protein LOC107919290.
  
     0.491
LOC107899832
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.489
LOC107952287
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.488
LOC107933555
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.486
LOC107886706
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.485
LOC107887817
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.477
LOC107960601
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.470
LOC107917409
Uncharacterized protein LOC107917409.
  
     0.469
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.