STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107908629Auxin-responsive protein SAUR67-like. (131 aa)    
Predicted Functional Partners:
LOC107953327
Protein NETWORKED 3A-like.
  
     0.521
LOC107922976
Protein NETWORKED 3A-like.
  
     0.506
LOC107940841
Putative lipid-binding protein AIR1.
  
     0.491
LOC107913224
Protein NETWORKED 3A-like.
  
     0.490
LOC107910945
Protein NETWORKED 3A-like.
  
     0.474
LOC107912784
Uncharacterized protein LOC107912784 isoform X1.
  
     0.462
LOC107935900
Probable purine permease 9.
  
     0.458
LOC107891647
Uncharacterized protein At4g22758-like.
  
     0.449
LOC107951592
Uncharacterized protein LOC107951592.
  
     0.434
LOC107935415
Uncharacterized protein LOC107935415.
  
     0.430
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.