STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107909197Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3-like isoform X1. (412 aa)    
Predicted Functional Partners:
LOC107912320
LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g30825, chloroplastic-like.
      
 0.630
LOC107941737
Pentatricopeptide repeat-containing protein At4g30825, chloroplastic-like.
      
 0.630
LOC107890161
Uncharacterized protein At3g49140-like.
  
  
 0.566
LOC107917885
Uncharacterized protein At3g49140-like isoform X1.
  
  
 0.557
LOC107913551
Uncharacterized protein At3g49140-like isoform X1.
  
  
 0.551
LOC107914729
Uncharacterized protein At3g49140-like isoform X1.
  
  
 0.549
LOC107952752
Uncharacterized protein LOC107952752.
  
     0.529
LOC107954656
Uncharacterized protein LOC107954656 isoform X1.
  
     0.528
LOC107910873
Uncharacterized protein LOC107910873.
  
     0.514
LOC107887247
Uncharacterized protein LOC107887247 isoform X1.
  
     0.509
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.