STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107910442Uncharacterized calcium-binding protein At1g02270-like. (522 aa)    
Predicted Functional Partners:
LOC107952886
Formin-like protein 19.
  
     0.450
LOC107886547
Uncharacterized protein LOC107886547.
  
     0.447
LOC107914596
CSC1-like protein RXW8.
  
     0.426
LOC107905542
NEP1-interacting protein-like 1 isoform X1.
  
     0.414
LOC107939756
12S seed storage protein CRD-like.
  
     0.408
LOC107915158
Uncharacterized protein LOC107915158 isoform X1.
  
     0.406
LOC107930726
Uncharacterized protein LOC107930726.
  
     0.404
LOC107889718
Uncharacterized protein LOC107889718 isoform X2.
  
     0.403
LOC107934209
Uncharacterized protein LOC107934209.
  
     0.403
LOC107942198
12S seed storage protein CRD-like.
  
     0.402
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.