STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107910839Nodal modulator 1-like. (1195 aa)    
Predicted Functional Partners:
LOC107889187
Nicalin; Belongs to the nicastrin family.
    
 
 0.762
LOC107891535
Nicalin; Belongs to the nicastrin family.
    
 
 0.762
LOC107906683
Nicalin; Belongs to the nicastrin family.
    
 
 0.762
LOC107959209
Nicalin; Belongs to the nicastrin family.
    
 
 0.762
LOC107935560
Transmembrane protein 147-like isoform X1.
  
 
 0.625
LOC107944606
Transmembrane protein 147-like.
  
 
 0.625
LOC107887025
Transmembrane protein 147-like.
  
 
 0.624
LOC107918472
Protein N-terminal asparagine amidohydrolase-like.
      
 0.505
LOC107949552
RNA polymerase I-specific transcription initiation factor RRN3-like.
      
 0.491
LOC107951635
RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1.
      
 0.491
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.