STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107911547Uncharacterized protein LOC107911547. (156 aa)    
Predicted Functional Partners:
LOC107906686
Uncharacterized protein At2g27730, mitochondrial-like isoform X1.
  
     0.483
LOC107925752
Transcription factor ORG2-like.
  
     0.467
LOC107898402
Uncharacterized protein LOC107898402.
  
     0.458
LOC107887786
Uncharacterized protein LOC107887786.
  
     0.450
LOC107925846
Transcription factor ORG2-like.
  
     0.449
LOC107948036
Uncharacterized protein LOC107948036.
  
     0.449
LOC107948035
Uncharacterized protein LOC107948035.
  
     0.446
LOC107929357
Uncharacterized protein LOC107929357.
  
     0.443
LOC107945277
Uncharacterized protein LOC107945277.
  
     0.443
LOC107898170
Uncharacterized protein LOC107898170.
  
     0.442
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.