STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107911754Histone-lysine N-methyltransferase setd3-like. (497 aa)    
Predicted Functional Partners:
LOC107890677
Protein FAM63A-like.
    
 0.515
LOC107896488
Protein FAM63A-like.
    
 0.515
LOC107904497
Protein FAM63A-like isoform X1.
    
 0.515
LOC107923040
Protein FAM63A-like isoform X1.
    
 0.515
LOC107926977
Protein FAM63A-like.
    
 0.515
LOC107930061
Protein FAM63A-like.
    
 0.515
LOC107948759
Ribosomal protein L11 methyltransferase-like.
      
 0.459
LOC107942538
Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA).
   
  
 0.442
LOC107898115
Uncharacterized protein LOC107898115.
  
     0.409
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.