STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1079103691-aminocyclopropane-1-carboxylate oxidase 5-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (307 aa)    
Predicted Functional Partners:
LOC107902833
1-aminocyclopropane-1-carboxylate synthase 7-like.
     
 0.869
LOC107932215
1-aminocyclopropane-1-carboxylate synthase 7.
     
 0.868
LOC107897109
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.849
LOC107913345
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.849
LOC107915933
1-aminocyclopropane-1-carboxylate synthase 9-like.
     
 0.849
LOC107950911
1-aminocyclopropane-1-carboxylate synthase CMA101-like.
     
 0.849
ACCS-1
1-aminocyclopropane-1-carboxylate synthase-like.
     
 0.845
LOC107903140
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.837
LOC107905210
1-aminocyclopropane-1-carboxylate synthase 3-like.
     
 0.837
LOC107917665
1-aminocyclopropane-1-carboxylate synthase CMA101-like.
     
 0.837
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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