STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107912085Uncharacterized protein LOC107912085. (167 aa)    
Predicted Functional Partners:
LOC107939843
Uncharacterized protein LOC107939843 isoform X1.
  
  
 
0.550
LOC107924841
Uncharacterized protein LOC107924841 isoform X1.
  
  
 
0.544
LOC107897643
LEC14B homolog.
     
  0.540
LOC107898550
DDB1- and CUL4-associated factor 8-like.
     
  0.540
LOC107899514
Uncharacterized protein LOC107899514.
     
  0.540
LOC107900505
Uncharacterized protein LOC107900505.
     
  0.540
LOC107900938
Uncharacterized protein LOC107900938 isoform X1.
     
  0.540
LOC107903244
Uncharacterized protein LOC107903244.
     
  0.540
LOC107905062
WD and tetratricopeptide repeats protein 1-like.
     
  0.540
LOC107905955
Uncharacterized protein LOC107905955.
     
  0.540
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.