STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107910978F-box protein At3g07870-like. (406 aa)    
Predicted Functional Partners:
LOC107914549
Uncharacterized protein LOC107914549 isoform X1.
  
     0.465
LOC107909026
Uncharacterized protein LOC107909026.
  
     0.461
LOC107896752
Uncharacterized protein LOC107896752 isoform X1.
  
     0.460
LOC107886886
Uncharacterized protein LOC107886886.
  
     0.459
LOC107945104
Protein NLP2-like.
  
 
   0.450
LOC107892184
Uncharacterized protein LOC107892184.
  
     0.447
LOC107931923
Protein NLP2-like.
  
 
   0.447
LOC107963932
Uncharacterized protein LOC107963932.
  
     0.445
LOC107960825
Uncharacterized protein LOC107960825.
  
     0.444
LOC107950286
Uncharacterized protein LOC107950286.
  
     0.443
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.