STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107913211Flavin-containing monooxygenase. (378 aa)    
Predicted Functional Partners:
LOC107900603
Aldehyde dehydrogenase family 7 member B4-like; Belongs to the aldehyde dehydrogenase family.
  
 
 0.698
LOC107886550
L-tryptophan--pyruvate aminotransferase 1-like.
     
 0.694
LOC107890884
Tryptophan aminotransferase-related protein 2-like.
     
 0.694
LOC107898660
L-tryptophan--pyruvate aminotransferase 1-like.
     
 0.694
LOC107898658
L-tryptophan--pyruvate aminotransferase 1-like.
     
 0.694
LOC107909692
L-tryptophan--pyruvate aminotransferase 1-like.
     
 0.694
LOC107933359
L-tryptophan--pyruvate aminotransferase 1-like.
     
 0.694
LOC107933665
Tryptophan aminotransferase-related protein 2-like.
     
 0.694
LOC107901426
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.690
LOC107909433
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.690
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.