STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107913401cyclin-D4-2-like; Belongs to the cyclin family. (374 aa)    
Predicted Functional Partners:
LOC107912981
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.649
LOC107959398
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.649
LOC107897016
Retinoblastoma-related protein-like isoform X1.
    
 0.615
LOC107897018
Retinoblastoma-related protein-like.
    
 0.615
LOC107904399
Retinoblastoma-related protein-like isoform X1.
    
 0.615
LOC107904794
Retinoblastoma-related protein-like.
    
 0.615
LOC107927600
Retinoblastoma-related protein-like.
    
 0.615
LOC107927587
Retinoblastoma-related protein-like isoform X1.
    
 0.615
LOC107901746
Cell division control protein 2 homolog A isoform X1; Belongs to the protein kinase superfamily.
   
 0.592
LOC107930861
Cell division control protein 2 homolog; Belongs to the protein kinase superfamily.
   
 0.592
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.