STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107913303RuvB-like helicase; Belongs to the RuvB family. (465 aa)    
Predicted Functional Partners:
LOC107889188
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
LOC107891536
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
LOC107902779
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
LOC107910678
SWR1-complex protein 4-like isoform X1.
   
 0.997
LOC107926886
SWR1-complex protein 4-like isoform X1.
   
 0.997
LOC107959211
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
LOC107945368
Actin-related protein 4; Belongs to the actin family.
   
 0.996
LOC107909450
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
   
 0.990
LOC107912807
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
   
 0.990
LOC107912994
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family.
   
 0.990
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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