STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107913193Ethylene-responsive transcription factor 5-like. (218 aa)    
Predicted Functional Partners:
LOC107896705
Mitochondrial import receptor subunit TOM20-like isoform X1.
  
     0.502
LOC107896459
Mitochondrial import receptor subunit TOM20-like isoform X1.
  
     0.499
LOC107888752
Mitochondrial import receptor subunit TOM20-like.
  
     0.479
LOC107940647
Cyclic dof factor 1-like isoform X1.
  
     0.465
LOC107917433
Dof zinc finger protein DOF2.4-like.
  
     0.463
LOC107918695
Cyclic dof factor 1-like isoform X1.
  
     0.463
LOC107943835
Classical arabinogalactan protein 5.
    
 0.462
LOC107892160
Mitochondrial import receptor subunit TOM20-like.
  
     0.460
LOC107916234
Mitochondrial import receptor subunit TOM20-like.
  
     0.458
LOC107895806
PHD finger protein ALFIN-LIKE 4-like.
  
     0.453
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.