STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107914823Serine/threonine-protein kinase STY8-like. (381 aa)    
Predicted Functional Partners:
LOC107943835
Classical arabinogalactan protein 5.
    
 0.724
LOC107932209
Mitogen-activated protein kinase kinase 6-like isoform X1.
  
 
  0.521
LOC107911664
Serine/threonine-protein kinase ATG1t-like.
  
 
 
0.509
LOC107899470
Serine/threonine-protein kinase ATG1t-like.
  
 
 
0.505
LOC107952982
CDPK-related kinase 3-like isoform X3.
  
 
  0.482
LOC107954431
CDPK-related kinase 3-like isoform X1.
  
 
  0.476
LOC107889348
CDPK-related kinase 7-like.
  
 
  0.474
LOC107920590
CDPK-related kinase 5-like isoform X1.
  
 
  0.470
LOC107927993
CDPK-related protein kinase isoform X1.
  
 
  0.437
LOC107930476
Protein TIME FOR COFFEE-like.
   
 0.425
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.