STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107915100Probable xyloglucan galactosyltransferase GT14; Belongs to the glycosyltransferase 47 family. (519 aa)    
Predicted Functional Partners:
LOC107904333
Glycosyltransferase family protein 64 protein C5-like.
    
 0.568
LOC107904177
Glycosyltransferase family protein 64 protein C5-like.
    
 0.568
LOC107955163
Glycosyltransferase family 64 protein C4-like.
    
 0.568
LOC107960341
Glycosyltransferase family 64 protein C4-like isoform X1.
    
 0.568
LOC107898827
Beta-glucuronosyltransferase GlcAT14C-like.
      
 0.438
LOC107944003
Beta-glucuronosyltransferase GlcAT14C-like.
      
 0.438
LOC107886541
Beta-arabinofuranosyltransferase RAY1-like.
      
 0.426
LOC107909702
Beta-arabinofuranosyltransferase RAY1-like isoform X1.
      
 0.426
LOC107942516
Probable xyloglucan 6-xylosyltransferase 5.
  
 
 
 0.411
LOC107951265
Probable xyloglucan 6-xylosyltransferase 5.
  
 
 
 0.409
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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