STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107915599Uncharacterized mitochondrial protein AtMg00810-like. (244 aa)    
Predicted Functional Partners:
LOC107921688
Uncharacterized protein LOC107921688.
  
     0.532
LOC107956812
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.530
LOC107936685
Uncharacterized protein LOC107936685.
  
     0.528
LOC107887920
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.526
LOC107919382
Uncharacterized protein LOC107919382.
  
     0.523
LOC107933555
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.523
LOC107956206
Uncharacterized protein LOC107956206.
  
     0.523
LOC107895844
Uncharacterized protein LOC107895844.
  
     0.522
LOC107923553
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.522
LOC107956300
Uncharacterized protein LOC107956300.
  
     0.521
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.