STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107914218Uncharacterized protein LOC107914218 isoform X1. (1109 aa)    
Predicted Functional Partners:
LOC107889289
Putative GPI-anchor transamidase isoform X1.
    
 0.821
LOC107926738
Putative GPI-anchor transamidase isoform X1.
    
 0.821
LOC107897912
Glycosylphosphatidylinositol anchor attachment 1 protein-like.
    
 0.818
LOC107926075
Glycosylphosphatidylinositol anchor attachment 1 protein-like.
    
 0.818
LOC107925834
GPI transamidase component PIG-S-like.
    
 0.812
LOC107955400
GPI transamidase component PIG-S-like.
    
 0.812
LOC107928962
Phosphatidylinositol glycan anchor biosynthesis class U protein-like.
    
 0.799
LOC107934159
Phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X1.
    
 0.799
LOC107912559
LOW QUALITY PROTEIN: GPI transamidase component PIG-T homolog.
    
 0.796
LOC107923205
GPI transamidase component PIG-T-like.
    
 0.796
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.