STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107916225Flowering time control protein FCA-like isoform X1. (771 aa)    
Predicted Functional Partners:
LOC107938824
Flowering time control protein FY-like isoform X1.
  
 
 0.639
LOC107915529
Flowering time control protein FY.
   
 
 0.547
LOC107939237
Flowering time control protein FY-like isoform X1.
   
 
 0.547
LOC107900827
Cryptochrome-1-like isoform X1.
   
  
 0.521
LOC107905111
Cryptochrome-1-like isoform X1.
   
  
 0.521
LOC107957756
Cryptochrome-1-like isoform X1.
   
  
 0.521
LOC107911084
Phytochrome E-like.
      
 0.505
LOC107935905
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
      
 0.505
LOC107943158
Cyanobacterial phytochrome B-like.
      
 0.505
LOC107886212
Protein NBR1 homolog.
      
 0.497
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.