STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107916170Serine/threonine-protein kinase BLUS1-like. (474 aa)    
Predicted Functional Partners:
LOC107926227
Uncharacterized protein LOC107926227.
    
 
 0.831
LOC107910274
dnaJ protein ERDJ2A-like isoform X1.
    
 
 0.663
LOC107943532
dnaJ protein ERDJ2A-like.
    
 
 0.663
LOC107947323
dnaJ protein ERDJ2A-like.
    
 
 0.663
LOC107948455
dnaJ protein ERDJ2A-like isoform X1.
    
 
 0.663
LOC107899725
Protein transport protein Sec61 subunit gamma.
   
 
 0.615
LOC107911752
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.615
LOC107913429
Protein transport protein Sec61 subunit gamma-1-like.
   
 
 0.615
LOC107922879
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.615
LOC107937089
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.615
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.