STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107918013WSC domain-containing protein ARB_07867-like. (545 aa)    
Predicted Functional Partners:
LOC107895100
Uncharacterized protein LOC107895100 isoform X1.
    
 0.741
LOC107948805
Uncharacterized protein LOC107948805 isoform X1.
    
 0.741
LOC107886412
LOW QUALITY PROTEIN: DNA repair endonuclease UVH1-like.
   
 0.686
LOC107919892
DNA repair endonuclease UVH1-like isoform X1.
   
 0.686
LOC107923381
Uncharacterized protein LOC107923381 isoform X1.
   
 0.686
LOC107918625
Crossover junction endonuclease MUS81-like.
   
 0.672
LOC107933257
Crossover junction endonuclease MUS81-like isoform X1.
   
 0.672
LOC107943835
Classical arabinogalactan protein 5.
   
 0.671
LOC107935245
E3 ubiquitin-protein ligase FANCL-like isoform X1.
    
 0.657
LOC107950519
E3 ubiquitin-protein ligase FANCL-like isoform X1.
    
 0.657
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.