STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107917198Epidermis-specific secreted glycoprotein EP1-like. (313 aa)    
Predicted Functional Partners:
LOC107890345
Transcription repressor OFP6-like.
  
     0.490
LOC107942213
Transcription repressor OFP6-like.
  
     0.486
LOC107961095
F-box/kelch-repeat protein At1g23390-like.
  
     0.480
LOC107928145
Transcription repressor OFP6-like.
  
     0.472
LOC107922490
F-box/kelch-repeat protein At1g23390-like.
  
     0.463
LOC107925560
Transcription repressor OFP6-like.
  
     0.461
LOC107886560
F-box/kelch-repeat protein At1g23390-like.
  
     0.460
LOC107926495
Protein WVD2-like 7.
  
   
 0.458
LOC107924501
Transcription repressor OFP6-like.
  
     0.453
LOC107922067
Uncharacterized protein LOC107922067.
  
     0.451
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.