STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107918718Serine/threonine-protein kinase haspin-like. (593 aa)    
Predicted Functional Partners:
LOC107891337
Serine/threonine-protein kinase Aurora-3-like isoform X1; Belongs to the protein kinase superfamily.
   
 
 0.621
LOC107900918
Serine/threonine-protein kinase Aurora-3-like; Belongs to the protein kinase superfamily.
   
 
 0.621
LOC107916885
Protein MCM10 homolog isoform X1.
   
  
 0.612
LOC107921247
Protein MCM10 homolog.
   
  
 0.612
LOC107906979
Serine/threonine-protein kinase Aurora-1 isoform X1; Belongs to the protein kinase superfamily.
   
 
 0.579
LOC107929969
Serine/threonine-protein kinase Aurora-1-like; Belongs to the protein kinase superfamily.
   
 
 0.579
LOC107951396
Serine/threonine-protein kinase Aurora-1-like; Belongs to the protein kinase superfamily.
   
 
 0.579
LOC107953864
Serine/threonine-protein kinase Aurora-1-like; Belongs to the protein kinase superfamily.
   
 
 0.579
LOC107893766
Eukaryotic translation initiation factor NCBP-like; Belongs to the eukaryotic initiation factor 4E family.
   
    0.566
LOC107920746
Eukaryotic translation initiation factor NCBP-like; Belongs to the eukaryotic initiation factor 4E family.
   
    0.566
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.