STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107919114Transcription factor MYB39-like. (452 aa)    
Predicted Functional Partners:
LOC107938776
Transcription factor MYB98-like.
  
     0.517
LOC107893129
Transcriptional activator Myb-like.
  
     0.503
LOC107937454
Transcription factor MYB44-like.
  
     0.503
LOC107923244
Transcription factor WER-like isoform X1.
  
     0.501
LOC107930984
Transcriptional activator Myb-like.
  
     0.501
LOC107904701
Transcription factor MYB23-like isoform X1.
  
     0.500
LOC107892810
Myb-related protein MYBAS1-like.
  
     0.499
LOC107888592
Transcription factor MYB35-like.
  
     0.497
LOC107952640
Transcription factor MYB59-like.
  
    0.496
LOC107950805
Transcription factor MYB59-like.
  
    0.494
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.