STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107917694Uncharacterized protein LOC107917694. (113 aa)    
Predicted Functional Partners:
LOC107929104
Uncharacterized protein LOC107929104.
  
     0.537
LOC107936250
Uncharacterized protein LOC107936250.
  
     0.535
LOC107891368
LOW QUALITY PROTEIN: uncharacterized protein LOC107891368.
  
     0.531
LOC107956578
Uncharacterized protein At1g15400-like.
  
     0.529
LOC107944740
Uncharacterized protein At1g15400-like.
  
     0.528
LOC107906484
Uncharacterized protein At1g15400-like.
  
     0.527
LOC107940963
Uncharacterized protein At1g15400-like.
  
     0.527
LOC107900305
Uncharacterized protein At1g15400-like.
  
     0.526
LOC107963273
Uncharacterized protein At1g15400-like.
  
     0.526
LOC107902840
Uncharacterized protein At1g15400-like.
  
     0.525
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.