STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107919514VIN3-like protein 2 isoform X1. (731 aa)    
Predicted Functional Partners:
LOC107887181
Uncharacterized protein LOC107887181 isoform X1.
  
 0.872
LOC107908489
Uncharacterized protein LOC107908489 isoform X1.
  
 0.872
rps2
30S ribosomal protein S2, chloroplastic.
    
 
 0.844
LOC107897747
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
LOC107912592
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
LOC107912464
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
LOC107915059
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
LOC107924144
acetyl-CoA acetyltransferase, cytosolic 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
LOC107924670
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
LOC107954919
3-ketoacyl-CoA thiolase 2, peroxisomal-like isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.825
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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